diff --git a/.gitignore b/.gitignore index 7e827b2c..707bc447 100644 --- a/.gitignore +++ b/.gitignore @@ -6,12 +6,12 @@ dist/ .coverage coverage/ licenses.txt -examples_notebooks/*/lancedb examples_notebooks/*/data tests/fixtures/cache tests/fixtures/*/cache tests/fixtures/*/output -lancedb/ +output/lancedb + # Random .DS_Store diff --git a/.semversioner/next-release/patch-20250111053519838533.json b/.semversioner/next-release/patch-20250111053519838533.json new file mode 100644 index 00000000..a9f3c94e --- /dev/null +++ b/.semversioner/next-release/patch-20250111053519838533.json @@ -0,0 +1,4 @@ +{ + "type": "patch", + "description": "Fix example notebooks" +} diff --git a/cspell.config.yaml b/cspell.config.yaml index fb6322a7..587ccdc2 100644 --- a/cspell.config.yaml +++ b/cspell.config.yaml @@ -23,6 +23,7 @@ ignorePaths: - package.json - tests/fixtures/ - examples_notebooks/inputs/ + - docs/examples_notebooks/inputs/ - "*.csv" - "*.parquet" - "*.faiss" diff --git a/dictionary.txt b/dictionary.txt index 02851fcd..1c9bcc1e 100644 --- a/dictionary.txt +++ b/dictionary.txt @@ -25,6 +25,7 @@ fillna noqa dtypes ints +genid # Azure abfs diff --git a/docs/examples_notebooks/drift_search.ipynb b/docs/examples_notebooks/drift_search.ipynb index 95e0115e..63872b36 100644 --- a/docs/examples_notebooks/drift_search.ipynb +++ b/docs/examples_notebooks/drift_search.ipynb @@ -2,7 +2,7 @@ "cells": [ { "cell_type": "code", - "execution_count": null, + "execution_count": 1, "metadata": {}, "outputs": [], "source": [ @@ -12,16 +12,19 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 2, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ - "Entity count: 434\n", - "Relationship count: 276\n", - "Text unit records: 12\n" + "Entity df columns: Index(['id', 'human_readable_id', 'title', 'community', 'level', 'degree', 'x',\n", + " 'y'],\n", + " dtype='object')\n", + "Entity count: 888\n", + "Relationship count: 812\n", + "Text unit records: 38\n" ] }, { @@ -46,6 +49,7 @@ " \n", " \n", " id\n", + " human_readable_id\n", " text\n", " n_tokens\n", " document_ids\n", @@ -57,103 +61,108 @@ " \n", " \n", " 0\n", - " 2cf7a230c367a2dfaf0fc3c903eb8948\n", - " # Operation: Dulce\\n\\n## Chapter 1\\n\\nThe thru...\n", - " 2500\n", - " [958fdd043f17ade63cb13570b59df295]\n", - " [b45241d70f0e43fca764df95b2b81f77, 4119fd06010...\n", - " [b35c3d1a7daa4924b6bdb58bc69c354d, a97e2ecd870...\n", - " [ad5a2020-cdec-4982-acdf-dbe5ee530066, 9d8a0fe...\n", + " aa55265004ced76e9050ed4b7a45c0496e10faa0eddb8a...\n", + " 1\n", + " ../\\nJACOB COLLIER: Honestly, I think mastery...\n", + " 1200\n", + " [1e0886ae010728d10b2972f66b88608dc82b8645d3085...\n", + " [9a062709-56dd-4bf2-8b41-926124b7a6f7, f8c54a6...\n", + " [9af066c8-031b-4c52-b93b-b37763f6f0f7, 5b15580...\n", + " [f91209d1-0939-452e-b51b-be1763e2a27d, f2274c3...\n", " \n", " \n", " 1\n", - " 6d1255303acb7c9dc951cb0f5fc3042c\n", - " be the same.\\n\\n\\*\\n\\nThe sense of foreboding...\n", - " 2500\n", - " [958fdd043f17ade63cb13570b59df295]\n", - " [b45241d70f0e43fca764df95b2b81f77, 4119fd06010...\n", - " [b35c3d1a7daa4924b6bdb58bc69c354d, a97e2ecd870...\n", - " [5d1c9126-c48d-4755-9f9c-f739c823f95f, ec64a42...\n", + " 7f0fb1d3bf517dc76dffa984eec7a25e851e44ead0df82...\n", + " 2\n", + " OMBERG: I grew up and started getting into al...\n", + " 1200\n", + " [1e0886ae010728d10b2972f66b88608dc82b8645d3085...\n", + " [9a062709-56dd-4bf2-8b41-926124b7a6f7, f8c54a6...\n", + " [c2ac3612-3aaf-440c-babd-e21f474e0366, 9aab0b4...\n", + " [13c74c18-439b-4419-8427-4ba826503055, 7120179...\n", " \n", " \n", " 2\n", - " e841f178310356740b2ee9101d12c97f\n", - " . \"Your take on these signal inconsistencies?\"...\n", - " 2500\n", - " [958fdd043f17ade63cb13570b59df295]\n", - " [b45241d70f0e43fca764df95b2b81f77, 4119fd06010...\n", - " [b35c3d1a7daa4924b6bdb58bc69c354d, a97e2ecd870...\n", - " [0b22a34b-32e9-46a4-a0e8-d3d5466eba15, 7e14972...\n", + " 27b739ceeddfa100f7be3cf002fd3a27aea2228f1a02c4...\n", + " 3\n", + " , you know, and it’s a very linear pathway too...\n", + " 1200\n", + " [1e0886ae010728d10b2972f66b88608dc82b8645d3085...\n", + " [9a062709-56dd-4bf2-8b41-926124b7a6f7, f8c54a6...\n", + " [9af066c8-031b-4c52-b93b-b37763f6f0f7, 5456bcb...\n", + " [a67f1c21-32ab-4eaa-b063-c815e7f3ea9d]\n", " \n", " \n", " 3\n", - " f36d96862b9366d7240b5c7ceb04f12b\n", - " , absorbed in the bewilderment of contact, whi...\n", - " 2500\n", - " [958fdd043f17ade63cb13570b59df295]\n", - " [b45241d70f0e43fca764df95b2b81f77, 4119fd06010...\n", - " [b35c3d1a7daa4924b6bdb58bc69c354d, 09f18f81442...\n", - " [9cd6d645-ab97-4b39-b02e-647cea9b5545, 50dc124...\n", + " d97017305e234cc51554d653447d73b58441e1ff0f99e4...\n", + " 4\n", + " you know, we started taking a lot of parts an...\n", + " 1200\n", + " [1e0886ae010728d10b2972f66b88608dc82b8645d3085...\n", + " [9a062709-56dd-4bf2-8b41-926124b7a6f7, f8c54a6...\n", + " [bac3dd9b-f5c8-4966-9dc3-87f1f5976e36, 4f41be8...\n", + " [695ac017-7c10-44ad-a681-3b4c1ae86a87]\n", " \n", " \n", " 4\n", - " f7d43808d2fb452cd953bf50c6de6bd4\n", - " were at once coherent and enigmatic: \"*Voyage...\n", - " 2500\n", - " [958fdd043f17ade63cb13570b59df295]\n", - " [b45241d70f0e43fca764df95b2b81f77, 4119fd06010...\n", - " [e02be3e37ca0454883a4c1fd859c24bb, 1dbc51475cb...\n", - " [87cf5900-6211-4e04-9115-50f3617c88b4]\n", + " 2b6d29f8a74b16ea9a70423bce803a08a5b9ed4e6a946b...\n", + " 5\n", + " only so much processing that my mind can do i...\n", + " 1200\n", + " [1e0886ae010728d10b2972f66b88608dc82b8645d3085...\n", + " [9a062709-56dd-4bf2-8b41-926124b7a6f7, f8c54a6...\n", + " [d225ff7b-ca47-4fab-8d9a-4f86111526f8, 3fddb40...\n", + " [d8a7ad5c-a170-430e-9f9d-902047371ee2]\n", " \n", " \n", "\n", "" ], "text/plain": [ - " id \\\n", - "0 2cf7a230c367a2dfaf0fc3c903eb8948 \n", - "1 6d1255303acb7c9dc951cb0f5fc3042c \n", - "2 e841f178310356740b2ee9101d12c97f \n", - "3 f36d96862b9366d7240b5c7ceb04f12b \n", - "4 f7d43808d2fb452cd953bf50c6de6bd4 \n", + " id human_readable_id \\\n", + "0 aa55265004ced76e9050ed4b7a45c0496e10faa0eddb8a... 1 \n", + "1 7f0fb1d3bf517dc76dffa984eec7a25e851e44ead0df82... 2 \n", + "2 27b739ceeddfa100f7be3cf002fd3a27aea2228f1a02c4... 3 \n", + "3 d97017305e234cc51554d653447d73b58441e1ff0f99e4... 4 \n", + "4 2b6d29f8a74b16ea9a70423bce803a08a5b9ed4e6a946b... 5 \n", "\n", " text n_tokens \\\n", - "0 # Operation: Dulce\\n\\n## Chapter 1\\n\\nThe thru... 2500 \n", - "1 be the same.\\n\\n\\*\\n\\nThe sense of foreboding... 2500 \n", - "2 . \"Your take on these signal inconsistencies?\"... 2500 \n", - "3 , absorbed in the bewilderment of contact, whi... 2500 \n", - "4 were at once coherent and enigmatic: \"*Voyage... 2500 \n", + "0 ../\\nJACOB COLLIER: Honestly, I think mastery... 1200 \n", + "1 OMBERG: I grew up and started getting into al... 1200 \n", + "2 , you know, and it’s a very linear pathway too... 1200 \n", + "3 you know, we started taking a lot of parts an... 1200 \n", + "4 only so much processing that my mind can do i... 1200 \n", "\n", - " document_ids \\\n", - "0 [958fdd043f17ade63cb13570b59df295] \n", - "1 [958fdd043f17ade63cb13570b59df295] \n", - "2 [958fdd043f17ade63cb13570b59df295] \n", - "3 [958fdd043f17ade63cb13570b59df295] \n", - "4 [958fdd043f17ade63cb13570b59df295] \n", + " document_ids \\\n", + "0 [1e0886ae010728d10b2972f66b88608dc82b8645d3085... \n", + "1 [1e0886ae010728d10b2972f66b88608dc82b8645d3085... \n", + "2 [1e0886ae010728d10b2972f66b88608dc82b8645d3085... \n", + "3 [1e0886ae010728d10b2972f66b88608dc82b8645d3085... \n", + "4 [1e0886ae010728d10b2972f66b88608dc82b8645d3085... \n", "\n", " entity_ids \\\n", - "0 [b45241d70f0e43fca764df95b2b81f77, 4119fd06010... \n", - "1 [b45241d70f0e43fca764df95b2b81f77, 4119fd06010... \n", - "2 [b45241d70f0e43fca764df95b2b81f77, 4119fd06010... \n", - "3 [b45241d70f0e43fca764df95b2b81f77, 4119fd06010... \n", - "4 [b45241d70f0e43fca764df95b2b81f77, 4119fd06010... \n", + "0 [9a062709-56dd-4bf2-8b41-926124b7a6f7, f8c54a6... \n", + "1 [9a062709-56dd-4bf2-8b41-926124b7a6f7, f8c54a6... \n", + "2 [9a062709-56dd-4bf2-8b41-926124b7a6f7, f8c54a6... \n", + "3 [9a062709-56dd-4bf2-8b41-926124b7a6f7, f8c54a6... \n", + "4 [9a062709-56dd-4bf2-8b41-926124b7a6f7, f8c54a6... \n", "\n", " relationship_ids \\\n", - "0 [b35c3d1a7daa4924b6bdb58bc69c354d, a97e2ecd870... \n", - "1 [b35c3d1a7daa4924b6bdb58bc69c354d, a97e2ecd870... \n", - "2 [b35c3d1a7daa4924b6bdb58bc69c354d, a97e2ecd870... \n", - "3 [b35c3d1a7daa4924b6bdb58bc69c354d, 09f18f81442... \n", - "4 [e02be3e37ca0454883a4c1fd859c24bb, 1dbc51475cb... \n", + "0 [9af066c8-031b-4c52-b93b-b37763f6f0f7, 5b15580... \n", + "1 [c2ac3612-3aaf-440c-babd-e21f474e0366, 9aab0b4... \n", + "2 [9af066c8-031b-4c52-b93b-b37763f6f0f7, 5456bcb... \n", + "3 [bac3dd9b-f5c8-4966-9dc3-87f1f5976e36, 4f41be8... \n", + "4 [d225ff7b-ca47-4fab-8d9a-4f86111526f8, 3fddb40... \n", "\n", " covariate_ids \n", - "0 [ad5a2020-cdec-4982-acdf-dbe5ee530066, 9d8a0fe... \n", - "1 [5d1c9126-c48d-4755-9f9c-f739c823f95f, ec64a42... \n", - "2 [0b22a34b-32e9-46a4-a0e8-d3d5466eba15, 7e14972... \n", - "3 [9cd6d645-ab97-4b39-b02e-647cea9b5545, 50dc124... \n", - "4 [87cf5900-6211-4e04-9115-50f3617c88b4] " + "0 [f91209d1-0939-452e-b51b-be1763e2a27d, f2274c3... \n", + "1 [13c74c18-439b-4419-8427-4ba826503055, 7120179... \n", + "2 [a67f1c21-32ab-4eaa-b063-c815e7f3ea9d] \n", + "3 [695ac017-7c10-44ad-a681-3b4c1ae86a87] \n", + "4 [d8a7ad5c-a170-430e-9f9d-902047371ee2] " ] }, - "execution_count": 1, + "execution_count": 2, "metadata": {}, "output_type": "execute_result" } @@ -165,9 +174,11 @@ "import pandas as pd\n", "import tiktoken\n", "\n", + "from graphrag.config.models.drift_search_config import DRIFTSearchConfig\n", "from graphrag.query.indexer_adapters import (\n", " read_indexer_entities,\n", " read_indexer_relationships,\n", + " read_indexer_report_embeddings,\n", " read_indexer_reports,\n", " read_indexer_text_units,\n", ")\n", @@ -196,6 +207,8 @@ "entity_df = pd.read_parquet(f\"{INPUT_DIR}/{ENTITY_TABLE}.parquet\")\n", "entity_embedding_df = pd.read_parquet(f\"{INPUT_DIR}/{ENTITY_EMBEDDING_TABLE}.parquet\")\n", "\n", + "print(f\"Entity df columns: {entity_df.columns}\")\n", + "\n", "entities = read_indexer_entities(entity_df, entity_embedding_df, COMMUNITY_LEVEL)\n", "\n", "# load description embeddings to an in-memory lancedb vectorstore\n", @@ -205,6 +218,11 @@ ")\n", "description_embedding_store.connect(db_uri=LANCEDB_URI)\n", "\n", + "full_content_embedding_store = LanceDBVectorStore(\n", + " collection_name=\"default-community-full_content\",\n", + ")\n", + "full_content_embedding_store.connect(db_uri=LANCEDB_URI)\n", + "\n", "print(f\"Entity count: {len(entity_df)}\")\n", "entity_df.head()\n", "\n", @@ -223,7 +241,7 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 3, "metadata": {}, "outputs": [], "source": [ @@ -238,7 +256,7 @@ " max_retries=20,\n", ")\n", "\n", - "token_encoder = tiktoken.get_encoding(\"cl100k_base\")\n", + "token_encoder = tiktoken.encoding_for_model(llm_model)\n", "\n", "text_embedder = OpenAIEmbedding(\n", " api_key=api_key,\n", @@ -252,17 +270,9 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 4, "metadata": {}, - "outputs": [ - { - "name": "stdout", - "output_type": "stream", - "text": [ - "Embeddings file already exists at ./inputs/operation dulce/create_final_community_reports_with_embeddings.parquet\n" - ] - } - ], + "outputs": [], "source": [ "def read_community_reports(\n", " input_dir: str,\n", @@ -279,15 +289,25 @@ " entity_df,\n", " COMMUNITY_LEVEL,\n", " content_embedding_col=\"full_content_embeddings\",\n", - ")" + ")\n", + "read_indexer_report_embeddings(reports, full_content_embedding_store)" ] }, { "cell_type": "code", - "execution_count": 4, + "execution_count": 5, "metadata": {}, "outputs": [], "source": [ + "drift_params = DRIFTSearchConfig(\n", + " temperature=0,\n", + " max_tokens=12_000,\n", + " primer_folds=1,\n", + " drift_k_followups=3,\n", + " n_depth=3,\n", + " n=1,\n", + ")\n", + "\n", "context_builder = DRIFTSearchContextBuilder(\n", " chat_llm=chat_llm,\n", " text_embedder=text_embedder,\n", @@ -296,6 +316,8 @@ " reports=reports,\n", " entity_text_embeddings=description_embedding_store,\n", " text_units=text_units,\n", + " token_encoder=token_encoder,\n", + " config=drift_params,\n", ")\n", "\n", "search = DRIFTSearch(\n", @@ -305,7 +327,7 @@ }, { "cell_type": "code", - "execution_count": 5, + "execution_count": 6, "metadata": {}, "outputs": [ { @@ -314,83 +336,39 @@ "text": [ "/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/numpy/core/fromnumeric.py:59: FutureWarning: 'DataFrame.swapaxes' is deprecated and will be removed in a future version. Please use 'DataFrame.transpose' instead.\n", " return bound(*args, **kwds)\n", - "100%|██████████| 5/5 [00:24<00:00, 4.91s/it]\n", - "100%|██████████| 20/20 [01:14<00:00, 3.71s/it]\n", - " 70%|███████ | 14/20 [01:54<00:26, 4.46s/it]Exception in _asearch\n", + " 40%|████ | 8/20 [01:12<02:55, 14.65s/it] Failed to parse search response: {\n", + " \"response\": \"# Mercer's Background and Mentorship Style\\n\\n## Background and Experience\\n\\nAgent Alex Mercer is depicted as a seasoned and determined member of the Paranormal Military Squad, tasked with the critical mission of Operation: Dulce. His background is characterized by a blend of military discipline and a deep-seated curiosity for the unknown. This duality is evident in his interactions and decision-making processes throughout the mission.\\n\\nMercer's experience in the field has honed his ability to balance protocol with intuition. He is described as having a \" \n", + " , \"unfailing determination\" \n", + " \n", "Traceback (most recent call last):\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/httpx/_transports/default.py\", line 72, in map_httpcore_exceptions\n", - " yield\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/httpx/_transports/default.py\", line 257, in __aiter__\n", - " async for part in self._httpcore_stream:\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/httpcore/_async/connection_pool.py\", line 367, in __aiter__\n", - " raise exc from None\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/httpcore/_async/connection_pool.py\", line 363, in __aiter__\n", - " async for part in self._stream:\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/httpcore/_async/http11.py\", line 349, in __aiter__\n", - " raise exc\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/httpcore/_async/http11.py\", line 341, in __aiter__\n", - " async for chunk in self._connection._receive_response_body(**kwargs):\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/httpcore/_async/http11.py\", line 210, in _receive_response_body\n", - " event = await self._receive_event(timeout=timeout)\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/httpcore/_async/http11.py\", line 224, in _receive_event\n", - " data = await self._network_stream.read(\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/httpcore/_backends/anyio.py\", line 32, in read\n", - " with map_exceptions(exc_map):\n", - " File \"/usr/lib/python3.10/contextlib.py\", line 153, in __exit__\n", - " self.gen.throw(typ, value, traceback)\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/httpcore/_exceptions.py\", line 14, in map_exceptions\n", - " raise to_exc(exc) from exc\n", - "httpcore.ReadError\n", - "\n", - "The above exception was the direct cause of the following exception:\n", - "\n", + " File \"/home/alonsog/workspace/graphrag-gh/graphrag/graphrag/query/structured_search/drift_search/action.py\", line 76, in asearch\n", + " response = json.loads(search_result.response)\n", + " File \"/usr/lib/python3.10/json/__init__.py\", line 346, in loads\n", + " return _default_decoder.decode(s)\n", + " File \"/usr/lib/python3.10/json/decoder.py\", line 337, in decode\n", + " obj, end = self.raw_decode(s, idx=_w(s, 0).end())\n", + " File \"/usr/lib/python3.10/json/decoder.py\", line 353, in raw_decode\n", + " obj, end = self.scan_once(s, idx)\n", + "json.decoder.JSONDecodeError: Expecting ':' delimiter: line 4 column 602 (char 1218)\n", + "No answer found for query: How does Mercer's background and experience influence his mentorship style?\n", + "No follow-up actions found for response: {}\n", + "Failed to parse search response: {\n", + " \"response\": \"# Agent Mercer's Leadership Style Compared to Other Members of the Paranormal Military Squad\\n\\n## Agent Alex Mercer's Leadership Style\\n\\nAgent Alex Mercer is depicted as a leader who balances strategic command with a deep sense of curiosity and a drive for understanding. His leadership style is characterized by a blend of military discipline and intellectual engagement. Mercer is portrayed as someone who values the input and expertise of his team members, fostering a collaborative environment where each member's strengths are utilized effectively. For instance, he often seeks the insights of Dr. Jordan Hayes and Sam Rivera, recognizing their expertise in deciphering alien signals and technological anomalies [Data: Sources (20, 16, 18, 23, 24)]. This approach not only enhances the team's problem-solving capabilities but also builds a sense of mutual respect and trust among the squad.\\n\\nMercer's leadership is also marked by his ability to remain calm and composed under pressure. He is described as having a \" , \"steely gaze\" \n", "Traceback (most recent call last):\n", - " File \"/home/alonsog/workspace/graphrag-gh/graphrag/graphrag/query/structured_search/local_search/search.py\", line 91, in asearch\n", - " response = await self.llm.agenerate(\n", - " File \"/home/alonsog/workspace/graphrag-gh/graphrag/graphrag/query/llm/oai/chat_openai.py\", line 142, in agenerate\n", - " async for attempt in retryer:\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/tenacity/asyncio/__init__.py\", line 166, in __anext__\n", - " do = await self.iter(retry_state=self._retry_state)\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/tenacity/asyncio/__init__.py\", line 153, in iter\n", - " result = await action(retry_state)\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/tenacity/_utils.py\", line 99, in inner\n", - " return call(*args, **kwargs)\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/tenacity/__init__.py\", line 398, in \n", - " self._add_action_func(lambda rs: rs.outcome.result())\n", - " File \"/usr/lib/python3.10/concurrent/futures/_base.py\", line 451, in result\n", - " return self.__get_result()\n", - " File \"/usr/lib/python3.10/concurrent/futures/_base.py\", line 403, in __get_result\n", - " raise self._exception\n", - " File \"/home/alonsog/workspace/graphrag-gh/graphrag/graphrag/query/llm/oai/chat_openai.py\", line 144, in agenerate\n", - " return await self._agenerate(\n", - " File \"/home/alonsog/workspace/graphrag-gh/graphrag/graphrag/query/llm/oai/chat_openai.py\", line 278, in _agenerate\n", - " chunk = await response.__anext__() # type: ignore\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/openai/_streaming.py\", line 144, in __anext__\n", - " return await self._iterator.__anext__()\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/openai/_streaming.py\", line 160, in __stream__\n", - " async for sse in iterator:\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/openai/_streaming.py\", line 151, in _iter_events\n", - " async for sse in self._decoder.aiter_bytes(self.response.aiter_bytes()):\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/openai/_streaming.py\", line 302, in aiter_bytes\n", - " async for chunk in self._aiter_chunks(iterator):\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/openai/_streaming.py\", line 313, in _aiter_chunks\n", - " async for chunk in iterator:\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/httpx/_models.py\", line 931, in aiter_bytes\n", - " async for raw_bytes in self.aiter_raw():\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/httpx/_models.py\", line 989, in aiter_raw\n", - " async for raw_stream_bytes in self.stream:\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/httpx/_client.py\", line 150, in __aiter__\n", - " async for chunk in self._stream:\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/httpx/_transports/default.py\", line 256, in __aiter__\n", - " with map_httpcore_exceptions():\n", - " File \"/usr/lib/python3.10/contextlib.py\", line 153, in __exit__\n", - " self.gen.throw(typ, value, traceback)\n", - " File \"/home/alonsog/.cache/pypoetry/virtualenvs/graphrag-ta_-cxM1-py3.10/lib/python3.10/site-packages/httpx/_transports/default.py\", line 89, in map_httpcore_exceptions\n", - " raise mapped_exc(message) from exc\n", - "httpx.ReadError\n", - "Failed to parse search response: \n", + " File \"/home/alonsog/workspace/graphrag-gh/graphrag/graphrag/query/structured_search/drift_search/action.py\", line 76, in asearch\n", + " response = json.loads(search_result.response)\n", + " File \"/usr/lib/python3.10/json/__init__.py\", line 346, in loads\n", + " return _default_decoder.decode(s)\n", + " File \"/usr/lib/python3.10/json/decoder.py\", line 337, in decode\n", + " obj, end = self.raw_decode(s, idx=_w(s, 0).end())\n", + " File \"/usr/lib/python3.10/json/decoder.py\", line 353, in raw_decode\n", + " obj, end = self.scan_once(s, idx)\n", + "json.decoder.JSONDecodeError: Expecting ':' delimiter: line 2 column 1655 (char 1656)\n", + "No answer found for query: How does Agent Mercer's leadership style compare to that of other members of the Paranormal Military Squad?\n", + "No follow-up actions found for response: {}\n", + " 95%|█████████▌| 19/20 [01:19<00:02, 2.78s/it]Failed to parse search response: \n", "Traceback (most recent call last):\n", - " File \"/home/alonsog/workspace/graphrag-gh/graphrag/graphrag/query/structured_search/drift_search/action.py\", line 74, in asearch\n", + " File \"/home/alonsog/workspace/graphrag-gh/graphrag/graphrag/query/structured_search/drift_search/action.py\", line 76, in asearch\n", " response = json.loads(search_result.response)\n", " File \"/usr/lib/python3.10/json/__init__.py\", line 346, in loads\n", " return _default_decoder.decode(s)\n", @@ -399,11 +377,13 @@ " File \"/usr/lib/python3.10/json/decoder.py\", line 355, in raw_decode\n", " raise JSONDecodeError(\"Expecting value\", s, err.value) from None\n", "json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0)\n", - "No answer found for query: What are the potential risks and challenges associated with establishing contact with extraterrestrial intelligence?\n", + "No answer found for query: What specific alien messages has Dr. Jordan Hayes decoded?\n", "No follow-up actions found for response: {}\n", - "100%|██████████| 20/20 [01:55<00:00, 5.76s/it]\n", - "No follow-up actions for action: What are the potential risks and challenges associated with establishing contact with extraterrestrial intelligence?\n", - "100%|██████████| 20/20 [01:13<00:00, 3.67s/it]\n" + "No follow-up actions for action: What specific alien messages has Dr. Jordan Hayes decoded?\n", + "No follow-up actions for action: How does Agent Mercer's leadership style compare to that of other members of the Paranormal Military Squad?\n", + "No follow-up actions for action: How does Mercer's background and experience influence his mentorship style?\n", + " 0%| | 0/20 [00:00\n", " \n", " \n", + " id\n", + " human_readable_id\n", " community\n", - " full_content\n", + " parent\n", " level\n", - " rank\n", " title\n", - " rank_explanation\n", " summary\n", + " full_content\n", + " rank\n", + " rank_explanation\n", " findings\n", " full_content_json\n", - " id\n", + " period\n", + " size\n", " \n", " \n", " \n", " \n", " 0\n", + " 16949a5d17b740b2b4a6f787b0a637f1\n", + " 43\n", + " 43\n", " 10\n", - 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"execution_count": 5, + "execution_count": 8, "metadata": {}, "output_type": "execute_result" } @@ -297,7 +321,7 @@ }, { "cell_type": "code", - "execution_count": 6, + "execution_count": 9, "metadata": {}, "outputs": [], "source": [ @@ -318,7 +342,7 @@ }, { "cell_type": "code", - "execution_count": 7, + "execution_count": 10, "metadata": {}, "outputs": [], "source": [ @@ -349,7 +373,7 @@ }, { "cell_type": "code", - "execution_count": 8, + "execution_count": 11, "metadata": {}, "outputs": [], "source": [ @@ -370,32 +394,30 @@ }, { "cell_type": "code", - "execution_count": 9, + "execution_count": 12, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ - "### Overview of Cosmic Vocalization\n", + "### Cosmic Vocalization: An Overview\n", "\n", - "Cosmic Vocalization is a phenomenon that has garnered significant attention within the community, involving various individuals and groups. It is perceived as an interstellar event with potential implications for both communication and security.\n", + "Cosmic Vocalization is a term coined by Jordan Hayes to describe a repeating sequence found in cryptic communications. This concept is pivotal in the realm of interstellar communication, serving as a common reference point for both humanity and extraterrestrial entities. The repeating sequence identified by Hayes is crucial for understanding and interpreting the signals exchanged during what is known as the Interstellar Duet [Data: Reports (65)].\n", "\n", - "### Key Perspectives\n", + "### Key Figures and Entities\n", "\n", - "**Alex Mercer's Viewpoint** \n", - "Alex Mercer perceives Cosmic Vocalization as part of an interstellar duet, suggesting that it may be a responsive or communicative event. This perspective highlights the potential for Cosmic Vocalization to be part of a larger cosmic interaction or dialogue [Data: Reports (6)].\n", + "#### Jordan Hayes\n", + "Jordan Hayes is a central figure in the development and understanding of Cosmic Vocalization. Hayes' work in identifying and describing the repeating sequence in cryptic communications has been instrumental in the ongoing efforts to interact with extraterrestrial intelligence. His contributions provide the foundational knowledge required to decode and engage with these alien signals [Data: Reports (65)].\n", "\n", - "**Taylor Cruz's Concerns** \n", - "Taylor Cruz raises concerns about the nature of Cosmic Vocalization, fearing it might be a homing tune. This adds a layer of urgency and potential threat, as it suggests that the vocalization could be attracting attention from unknown entities or forces [Data: Reports (6)].\n", + "#### Paranormal Military Squad\n", + "The Paranormal Military Squad plays a significant role in activities related to Cosmic Vocalization. Their responsibilities include responding to alien signals and participating in the Interstellar Duet. This squad is part of a broader initiative aimed at facilitating interstellar communication, ensuring that humanity can effectively engage with extraterrestrial entities [Data: Reports (65)].\n", "\n", - "### Involvement of the Paranormal Military Squad\n", + "### Implications\n", "\n", - "The Paranormal Military Squad is actively engaged with Cosmic Vocalization, indicating its significance in security measures. Their involvement suggests that the phenomenon is not only of scientific interest but also of strategic importance, potentially impacting national or global security [Data: Reports (6)].\n", + "The concept of Cosmic Vocalization and the involvement of key figures like Jordan Hayes and the Paranormal Military Squad highlight the collaborative efforts required to advance interstellar communication. By establishing a common ground for understanding cryptic signals, these efforts may pave the way for more profound interactions with extraterrestrial intelligence, potentially leading to significant advancements in our knowledge and capabilities.\n", "\n", - "### Conclusion\n", - "\n", - "Cosmic Vocalization is a complex and multifaceted phenomenon that involves various stakeholders, each with their own perspectives and concerns. The involvement of both individuals like Alex Mercer and Taylor Cruz, as well as organized groups like the Paranormal Military Squad, underscores its importance and the need for further investigation and understanding.\n" + "In summary, Cosmic Vocalization is a critical concept in the field of interstellar communication, with Jordan Hayes and the Paranormal Military Squad being key contributors to its development and application [Data: Reports (65)].\n" ] } ], @@ -409,7 +431,7 @@ }, { "cell_type": "code", - "execution_count": 10, + "execution_count": 13, "metadata": {}, "outputs": [ { @@ -443,185 +465,575 @@ " \n", " \n", " 0\n", - " 15\n", - " Dulce Base and the Paranormal Military Squad: ...\n", - " 1.00\n", - " # Dulce Base and the Paranormal Military Squad...\n", - " 9.5\n", - " \n", - " \n", - " 1\n", - " 11\n", - " Dulce and Paranormal Military Squad Operations\n", - " 0.30\n", - " # Dulce and Paranormal Military Squad Operatio...\n", + " 50\n", + " Alex Mercer and the Dulce Base Team\n", + " 0.956522\n", + " # 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Dulce Base Exploration by TEAM and MAINFRAME... 7.5 " + "0 # Alex Mercer and the Dulce Base Team\\n\\nThe c... 8.5 \n", + "1 # Kevin Scott and Technology Development\\n\\nTh... 7.5 \n", + "2 # Dulce Base and Paranormal Military Squad\\n\\n... 8.5 \n", + "3 # Paranormal Military Squad and Technological ... 8.5 \n", + "4 # First Contact with Extraterrestrial Civiliza... 9.5 \n", + "5 # Dulce Base Operations and Distress\\n\\nThe co... 8.5 \n", + "6 # Operation: Dulce in New Mexico\\n\\nThe commun... 7.5 \n", + "7 # Jacob Collier and Ben Bloomberg's First Tour... 7.5 \n", + "8 # Cosmic Translators and Alien Script\\n\\nThe c... 8.5 \n", + "9 # Terminal and Deep Hum\\n\\nThe community revol... 8.5 \n", + "10 # Paranormal Military Squad and Cosmic Dialogu... 8.5 \n", + "11 # Extraterrestrial Signal Decryption Community... 8.5 \n", + "12 # Growth Mindset and Stanford\\n\\nThe community... 7.5 \n", + "13 # Jacob Collier and Taylor Swift's Albums\\n\\nT... 7.5 \n", + "14 # Omberg and Jacob Collier Collaboration\\n\\nTh... 7.5 \n", + "15 # Galactic Orchestra and Interstellar Duet\\n\\n... 8.5 \n", + "16 # Alien Intelligence and Interstellar Siren's ... 8.5 \n", + "17 # Jimmy Fallon Project on Primetime Television... 6.5 \n", + "18 # Decryption Process and Digital Soundscape\\n\\... 6.5 \n", + "19 # Jacob Collier's Video Production\\n\\nThe comm... 4.0 \n", + "20 # Ben Bloomberg's Phone System and House\\n\\nTh... 3.0 \n", + "21 # Jacob Collier's Video Production\\n\\nThe comm... 3.0 \n", + "22 # Ben Bloomberg's Phone System and Parental Co... 3.0 \n", + "23 # Paranormal Military Squad and Alien Communic... 7.5 \n", + "24 # Paranormal Military Squad at Dulce Base\\n\\nT... 8.5 \n", + "25 # Jacob Collier and His Musical Collaborations... 8.5 \n", + "26 # Dr. Jordan Hayes and the Paranormal Military... 8.5 \n", + "27 # Operation: Dulce and Paranormal Military Squ... 8.5 \n", + "28 # Earth's Interstellar Communication and Galac... 8.5 \n", + "29 # Paranormal Military Squad and Interstellar C... 8.5 \n", + "30 # Threshold and Humankind's Communication with... 8.5 \n", + "31 # Dulce Military Base and Paranormal Operation... 8.5 \n", + "32 # Paranormal Military Squad and Interstellar C... 8.5 \n", + "33 # Behind the Tech and Microsoft Community\\n\\nT... 7.5 \n", + "34 # Djesse Vol. 3 and Djesse Albums Series\\n\\nTh... 7.5 \n", + "35 # Humanity and Cosmic Relationships\\n\\nThe com... 8.5 \n", + "36 # Pandemic and Its Impact on Work and Art\\n\\nT... 8.5 \n", + "37 # Decryption and Understanding of Alien Signal... 8.5 \n", + "38 # Montreux Jazz Festival and Key Performers\\n\\... 7.5 \n", + "39 # Robot Opera and Broadway\\n\\nThe community re... 7.5 \n", + "40 # Taylor Swift's Albums and Documentary\\n\\nThe... 7.0 \n", + "41 # Stage Equipment and Transportation Network\\n... 6.5 \n", + "42 # Jaron Lanier and His Collection of Musical I... 4.5 \n", + "43 # Prince of Monaco and Monaco\\n\\nThe community... 4.0 \n", + "44 # Paranormal Military Squad at Dulce Base\\n\\nT... 8.5 \n", + "45 # Paranormal Military Squad and Operation: Dul... 9.0 \n", + "46 # Ben Bloomberg and the Harmoniser Project\\n\\n... 7.5 \n", + "47 # Ben and Jacob's Fusion of Art and Technology... 7.5 \n", + "48 # Mission to Uncover Dulce's Mysteries\\n\\nThe ... 8.5 \n", + "49 # Taylor Swift and Album of the Year\\n\\nThe co... 7.5 \n", + "50 # Conversation between Kevin Scott and Jacob C... 8.5 \n", + "51 # Humanity and the Unseen Partner\\n\\nThe commu... 8.5 \n", + "52 # Jimmy Fallon Project on Primetime TV\\n\\nThe ... 7.5 \n", + "53 # Kevin Scott and the Engineering Mindset\\n\\nT... 6.5 \n", + "54 # North Hampton and Influential Musicians\\n\\nT... 6.5 \n", + "55 # Kevin Scott's Daughter and Her Fantasy Novel... 2.0 " ] }, - "execution_count": 10, + "execution_count": 13, "metadata": {}, "output_type": "execute_result" } @@ -633,14 +1045,14 @@ }, { "cell_type": "code", - "execution_count": 11, + "execution_count": 14, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ - "LLM calls: 2. Prompt tokens: 11237. Output tokens: 483.\n" + "LLM calls: 4. Prompt tokens: 33015. Output tokens: 655.\n" ] } ], @@ -654,7 +1066,7 @@ ], "metadata": { "kernelspec": { - "display_name": ".venv", + "display_name": "graphrag-ta_-cxM1-py3.10", "language": "python", "name": "python3" }, @@ -668,7 +1080,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.11.9" + "version": "3.10.12" } }, "nbformat": 4, diff --git a/docs/examples_notebooks/inputs/operation dulce/create_final_communities.parquet b/docs/examples_notebooks/inputs/operation dulce/create_final_communities.parquet index 0f367574..700a8125 100644 Binary files a/docs/examples_notebooks/inputs/operation dulce/create_final_communities.parquet and b/docs/examples_notebooks/inputs/operation dulce/create_final_communities.parquet differ diff --git a/docs/examples_notebooks/inputs/operation dulce/create_final_community_reports.parquet b/docs/examples_notebooks/inputs/operation dulce/create_final_community_reports.parquet index b85be4c3..251035aa 100644 Binary files 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