graphrag/graphrag/query/llm/text_utils.py
Copilot e84df28e64
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Improve internal logging functionality by using Python's standard logging module (#1956)
* Initial plan for issue

* Implement standard logging module and integrate with existing loggers

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Add test cases and improve documentation for standard logging

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Apply ruff formatting and add semversioner file for logging improvements

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Remove custom logger classes and refactor to use standard logging only

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Apply ruff formatting to resolve CI/CD test failures

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Add semversioner file and fix linting issues

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* ruff fixes

* fix spelling error

* Remove StandardProgressLogger and refactor to use standard logging

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Remove LoggerFactory and custom loggers, refactor to use standard logging

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Fix pyright error: use logger.info() instead of calling logger as function in cosmosdb_pipeline_storage.py

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* ruff fixes

* Remove deprecated logger files that were marked as deprecated placeholders

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Replace custom get_logger with standard Python logging

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Fix linting issues found by ruff check --fix

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* apply ruff check fixes

* add word to dictionary

* Fix type checker error in ModelManager.__new__ method

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Refactor multiple logging.getLogger() calls to use single logger per file

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Remove progress_logger parameter from build_index() and logger parameter from generate_indexing_prompts()

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Remove logger parameter from run_pipeline and standardize logger naming

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Replace logger parameter with log_level parameter in CLI commands

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Fix import ordering in notebook files to pass poetry poe check

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Remove --logger parameter from smoke test command

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Fix Windows CI/CD issue with log file cleanup in tests

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Add StreamHandler to root logger in __main__.py for CLI logging

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Only add StreamHandler if root logger doesn't have existing StreamHandler

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Fix import ordering in notebook files to pass ruff checks

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Replace logging.StreamHandler with colorlog.StreamHandler for colorized log output

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Regenerate poetry.lock file after adding colorlog dependency

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Fix import ordering in notebook files to pass ruff checks

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* move printing of dataframes to debug level

* remove colorlog for now

* Refactor workflow callbacks to inherit from logging.Handler

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Fix linting issues in workflow callback handlers

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Fix pyright type errors in blob and file workflow callbacks

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Refactor pipeline logging to use pure logging.Handler subclasses

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Rename workflow callback classes to workflow logger classes and move to logger directory

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* update dictionary

* apply ruff fixes

* fix function name

* simplify logger code

* update

* Remove error, warning, and log methods from WorkflowCallbacks and replace with standard logging

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* ruff fixes

* Fix pyright errors by removing WorkflowCallbacks from strategy type signatures

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Remove ConsoleWorkflowLogger and apply consistent formatter to all handlers

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* apply ruff fixes

* Refactor pipeline_logger.py to use standard FileHandler and remove FileWorkflowLogger

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Remove conditional azure import checks from blob_workflow_logger.py

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Fix pyright type checking errors in mock_provider.py and utils.py

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Run ruff check --fix to fix import ordering in notebooks

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Merge configure_logging and create_pipeline_logger into init_loggers function

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* Remove configure_logging and create_pipeline_logger functions, replace all usage with init_loggers

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* apply ruff fixes

* cleanup unused code

* Update init_loggers to accept GraphRagConfig instead of ReportingConfig

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* apply ruff check fixes

* Fix test failures by providing valid GraphRagConfig with required model configurations

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* apply ruff fixes

* remove logging_workflow_callback

* cleanup logging messages

* Add logging to track progress of pandas DataFrame apply operation in create_base_text_units

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* cleanup logger logic throughout codebase

* update

* more cleanup of old loggers

* small logger cleanup

* final code cleanup and added loggers to query

* add verbose logging to query

* minor code cleanup

* Fix broken unit tests for chunk_text and standard_logging

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* apply ruff fixes

* Fix test_chunk_text by mocking progress_ticker function instead of ProgressTicker class

Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>

* remove unnecessary logger

* remove rich and fix type annotation

* revert test formatting changes my by copilot

* promote graphrag logs to root logger

* add correct semversioner file

* revert change to file

* revert formatting changes that have no effect

* fix changes after merge with main

* revert unnecessary copilot changes

* remove whitespace

* cleanup docstring

* simplify some logic with less code

* update poetry lock file

* ruff fixes

---------

Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: jgbradley1 <654554+jgbradley1@users.noreply.github.com>
Co-authored-by: Josh Bradley <joshbradley@microsoft.com>
2025-07-09 18:29:03 -06:00

112 lines
3.4 KiB
Python

# Copyright (c) 2024 Microsoft Corporation.
# Licensed under the MIT License
"""Text Utilities for LLM."""
import json
import logging
import re
from collections.abc import Iterator
from itertools import islice
import tiktoken
from json_repair import repair_json
import graphrag.config.defaults as defs
logger = logging.getLogger(__name__)
def num_tokens(text: str, token_encoder: tiktoken.Encoding | None = None) -> int:
"""Return the number of tokens in the given text."""
if token_encoder is None:
token_encoder = tiktoken.get_encoding(defs.ENCODING_MODEL)
return len(token_encoder.encode(text)) # type: ignore
def batched(iterable: Iterator, n: int):
"""
Batch data into tuples of length n. The last batch may be shorter.
Taken from Python's cookbook: https://docs.python.org/3/library/itertools.html#itertools.batched
"""
# batched('ABCDEFG', 3) --> ABC DEF G
if n < 1:
value_error = "n must be at least one"
raise ValueError(value_error)
it = iter(iterable)
while batch := tuple(islice(it, n)):
yield batch
def chunk_text(
text: str, max_tokens: int, token_encoder: tiktoken.Encoding | None = None
):
"""Chunk text by token length."""
if token_encoder is None:
token_encoder = tiktoken.get_encoding(defs.ENCODING_MODEL)
tokens = token_encoder.encode(text) # type: ignore
chunk_iterator = batched(iter(tokens), max_tokens)
yield from (token_encoder.decode(list(chunk)) for chunk in chunk_iterator)
def try_parse_json_object(input: str, verbose: bool = True) -> tuple[str, dict]:
"""JSON cleaning and formatting utilities."""
# Sometimes, the LLM returns a json string with some extra description, this function will clean it up.
result = None
try:
# Try parse first
result = json.loads(input)
except json.JSONDecodeError:
if verbose:
logger.warning("Error decoding faulty json, attempting repair")
if result:
return input, result
pattern = r"\{(.*)\}"
match = re.search(pattern, input, re.DOTALL)
input = "{" + match.group(1) + "}" if match else input
# Clean up json string.
input = (
input.replace("{{", "{")
.replace("}}", "}")
.replace('"[{', "[{")
.replace('}]"', "}]")
.replace("\\", " ")
.replace("\\n", " ")
.replace("\n", " ")
.replace("\r", "")
.strip()
)
# Remove JSON Markdown Frame
if input.startswith("```json"):
input = input[len("```json") :]
if input.endswith("```"):
input = input[: len(input) - len("```")]
try:
result = json.loads(input)
except json.JSONDecodeError:
# Fixup potentially malformed json string using json_repair.
input = str(repair_json(json_str=input, return_objects=False))
# Generate JSON-string output using best-attempt prompting & parsing techniques.
try:
result = json.loads(input)
except json.JSONDecodeError:
if verbose:
logger.exception("error loading json, json=%s", input)
return input, {}
else:
if not isinstance(result, dict):
if verbose:
logger.exception("not expected dict type. type=%s:", type(result))
return input, {}
return input, result
else:
return input, result